PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008238622.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 362aa    MW: 42227 Da    PI: 6.8841
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008238622.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM181.32.4e-5671361129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeelv++yL+kk+++k+++l +vik+vd+yk+ePwdL++  k+ + +++ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk++
  XP_008238622.1   7 VPPGFRFHPTDEELVDYYLRKKIASKRIDL-DVIKDVDLYKIEPWDLQElcKIGTdDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI 100
                     69****************************.9***************954555553555************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +s ++ l+g++ktLvfykgrap+g+k+dW+mheyrle
  XP_008238622.1 101 YS-RNILIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136
                     **.999*****************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.19E-625156IPR003441NAC domain
PROSITE profilePS5100560.3057156IPR003441NAC domain
PfamPF023659.0E-298135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048759Biological Processxylem vessel member cell differentiation
GO:1901348Biological Processpositive regulation of secondary cell wall biogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MNTFSHVPPG FRFHPTDEEL VDYYLRKKIA SKRIDLDVIK DVDLYKIEPW DLQELCKIGT  60
DDQNEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YSRNILIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETSEN GTPQEEGWVV CRVFKKRLAT VRKIGDYESP CWYDQVSFMP  180
ELESPRRSIS HPYASPYNQQ QQHYSQCKQE LDLQYNMPHH HHHDSFLHLP QLESPKVPQS  240
APYGSMLQSS TLTQEEQLQQ HINQQQNMFN SSSSSLVLYN NNDQQSVDQV TDWRVLDKFV  300
ASQLSQDQQD ASKEVTNYSN AASMFHVANM LANESSRRPD NENLGQDYAS TSTSSCQIDL  360
WK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-51615714169Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00136DAPTransfer from AT1G12260Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008238622.10.0PREDICTED: NAC domain-containing protein 7-like
SwissprotQ9FWX21e-153NAC7_ARATH; NAC domain-containing protein 7
TrEMBLM5WRV60.0M5WRV6_PRUPE; Uncharacterized protein
STRINGVIT_02s0154g00020.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126933106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-141NAC 007